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Chinook salmon population declines span their geographic range with climate hypothesized as a major driver. Concerns of warming freshwater temperatures in their northern range gained urgency during 2019 when a heatwave coincided with premature mortality. This study examined heat stress during the 2019 heatwave compared to subsequent years and described water temperatures in western Alaska to understand the degree to which freshwater temperatures may be a stressor. Heat stress was prevalent among Chinook salmon captured in the 2019 heatwave (Kuskokwim tributaries: 90% in Kwethluk and 63% Takotna river), and variable in subsequent years (~8% to 60% across Kuskokwim tributaries and Norton Sound rivers). A review of water temperature data indicated potentially stressful temperatures (≥18°C) were most common and prolonged in the Yukon River, moderately common and prolonged in the Kuskokwim River, and relatively rare in the Norton Sound region. Water temperatures in 2019 broke several records for overall maximum and frequency of temperatures ≥18°C. Migration water temperatures and heat stress in northern Pacific salmon habitats varies more widely than previously recognized (up to 25°C). 

Abstract Permafrost thaw alters groundwater flow, river hydrology, stream‐catchment interactions, and the availability of carbon and nutrients in headwater streams. The impact of permafrost on watershed hydrology and biogeochemistry of headwater streams has been demonstrated, but there is little understanding of how permafrost influences fish in these ecosystems. We examined relations among permafrost characteristics, the resulting changes in water temperature, stream hydrology (e.g., discharge flashiness), and macroinvertebrates, with the abundance, biomass, and energy density of juvenile Dolly Varden (Salvelinus malma) and Arctic Grayling (Thymallus arcticus) across 10 headwater streams in northwestern Alaska. Macroinvertebrate density was driven by concentrations of dissolved carbon and nutrients supporting stream food webs. Dolly Varden abundance was primarily related to water temperature with fewer fish in warmer streams, whereas Dolly Varden energy density decreased with the flashiness of the headwater streams. Dolly Varden biomass was related to both temperature and bottom‐up food web effects. The energy density of Arctic Grayling decreased with warmer temperatures and discharge flashiness. These relations demonstrate the importance of terrestrial–aquatic connections in permafrost landscapes and indicate the complexity of landscape effects on fish. Because permafrost thaw is one of the most impactful changes occurring as the Arctic warms, an improved understanding of how stream temperature, hydrology, and bottom‐up food web processes influence fish populations can aid forecasting of future conditions across the Arctic. 

Abstract Climate change in the Arctic is altering watershed hydrologic processes and biogeochemistry. Here, we present an emergent threat to Arctic watersheds based on observations from 75 streams in Alaska’s Brooks Range that recently turned orange, reflecting increased loading of iron and toxic metals. Using remote sensing, we constrain the timing of stream discoloration to the last 10 years, a period of rapid warming and snowfall, suggesting impairment is likely due to permafrost thaw. Thawing permafrost can foster chemical weathering of minerals, microbial reduction of soil iron, and groundwater transport of metals to streams. Compared to clear reference streams, orange streams have lower pH, higher turbidity, and higher sulfate, iron, and trace metal concentrations, supporting sulfide mineral weathering as a primary mobilization process. Stream discoloration was associated with dramatic declines in macroinvertebrate diversity and fish abundance. These findings have considerable implications for drinking water supplies and subsistence fisheries in rural Alaska.